Brain diffusion tractography and connectomics – Connectomics – Diffusion MRI

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Brain diffusion tractography and connectomics – Connectomics – Diffusion MRI

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dMRI-talk

On Github arybinski / dMRI-talk

Brain diffusion tractography and connectomics

arybinski.github.io/dMRI-talk

Adam Rybiński

Connectomics

github.com/arybinski/diffusionNetworks

Diffusion MRI

Modeling diffusion

Diffusion statistics

Mean diffusivity
Fractional anisotropy
Principal diffusion direction

From diffusion to tracks

Tractography

Deterministic

Probabilistic

Global

Multi-Scale Diffusion Estimation and Tractography

Fibercup

(Fillard, Pierre, et al., 2011)

Quickbundles

(Garyfallidis, 2012)

DIPY: Diffusion MRI in Python

Part of the NIPY community

Started in 2009 by Eleftherios Garyfallidis

adam@rybinski.info
github.com/arybinski
arybinski.github.io/dMRI-talk
Brain diffusion tractography and connectomics arybinski.github.io/dMRI-talk Adam Rybiński