Access to a combination of demographic, viral presence/absence, behavioural and sequence data (which match up to varying degrees)
Why? (Academic)
Whilst we're very aware of the existence and zoonotic potential of viruses such as SIV and SFV, we still know relatively little of their wildlife dynamics
Various studies have approached single viruses in the past, but typically very "disconnected" overall
Faecal virological data alone, occasionally with age, maternal relations, or dominance hierarchy
Why? (General)
Primate zoonoses remain a concern - Precedent set by SIV, albeit with this clearly indicated to be a rare consequence likely borne of an unusual set of circumstances
Better understanding how these pathogens behave in the wild may better inform us about if and how they could pose a risk to the human population
Also, interesting from a wildlife disease epidemiology perspective
Which?
Whilst SIV really should be familiar to you all, others may well be less so
Simian Foamy Virus - Retrovirus transmitted through saliva
Simian Haemorrhagic Fever Viruses - Arteriviruses transmitted through ???
Simian Pegivirus - Flavivirus transmitted maybe through sexual, vertical and parenteral routes
An update on last year
LVZ 2015 - Beginning to unpick behavioural dataset
Mid 2015 - Viral takeover - Behavioural work drifts away
End 2015 - Virus-level analysis "complete"
Virus-level findings, in (very) brief
Age-dependent accumulation of all viruses, especially in males
Coinfection at the level of viral presence, and sequence co-clustering for the SHFV viruses
Detection of viral clusters between siblings for all viruses, between mother-offspring pairs for SHFV2
Non-familial clustering between some male-female pairs for SHFV1 + 2
Positive correlation between enacting aggressive behaviour in year of sampling (2012) and SHFV infection status
Where next?
3 years of copulatory/agonistic data
Alongside 9 years of general behavioural data
One-off virus sampling sampling in 2012 + 2010
Synthesising behavioural and virological data
3 years of sociosexual behaviour provide a basis to consider the relationship between grooming interactions, nearest-neighbour interactions and agonism/copulation
This can then be expanded into many years of past behaviour
Key aims of this work
Identify patterns of associative/affiliative behaviour and demographic factors associated with agonism/copulation
Use these to infer past interactions and dominance
Compare these to both distribution of infection, and clustering thereof
Useful references
Molecular Ecology and Natural History of Simian Foamy Virus Infection in Wild-Living Chimpanzees, Liu et al. 2008
Simian Immunodeficiency Virus Infection in Free-Ranging Sooty Mangabeys (Cercocebus atys atys) from the Tai Forest, Cote d'Ivoire: Implications for the Origin of Epidemic Human Immunodeficiency Virus Type 2, Santiago et al. 2005
Familiarity and dominance relations among female sooty mangabeys in the Tai National Park, Range et al. 2002