Tuesday

Tutorials

About the BioJS tutorial.

Wednesday

Keynote: Data visualization methods

Kwan-Liu Ma

Storytelling

Breakout session

• Use of colour
• Communicating the latest science to the public

Thursday

Proteins

• Dynamics Frauke Gräter
• Mechanisms Monica Zoppè
• Proteins & mesoscale data Graham Johnson
• Aquaria Christian Stolte

• Animation and rendering. Mechanical forces. Public outreach
• Visalisation at different scales
• CellPack software, visualise whole context, packed elements, animation
• Aquaria: View protein structure, feaures, sequences; nice design study; mix web tech and Java, compatibility issues

Cells

• Integrated omics data David James
• Cellular systems Hiroaki Kitano
• Cellular imaging Nico Scherf

• Omics
• Garuda platform (set of tools and widgets)
• Visualisation of microscopy images

Breakout session

• 2D visualisations of proteins shape
• Visualising protein-protein contacts

• There is not much consistency about how proteins are represented. Can we identify some good practice examples and technologies to apply these?
• Contact prediction is now becoming a staple method for structure prediction, but visualising contacts can be tricky. We can use contact maps, but translating the 2D representation to the 3D structure isn't always easy!

Keynote: Communication

Gaël McGill

Keynote: Communication

Gaël McGill

Wilson’s Life on Earth iBooks

Keynote: Communication

Gaël McGill

Wilson’s Life on Earth iBooks

VIZBI Art & Biology Evening

Friday

Keynote: Usability & computer interfaces

Fred Brooks

Brook's Books

The Mythical Man-Month

• Difference between a software and a hardware team?
• "adding manpower to a late software project makes it later"

• "Never underestimate user avoidance of physical activity"
• "Visualize to inform, not to impress"
• win-win teams
• Maintenance conversation - only bosses can do it
• Dealing with budget is easy - each team pays its part

Tissues & Organisms

• 3D Imaging: For a more complete view of the developing embryo Paula Murphy
• Physiology & function Katja Bühler
• Biophotonics for cancer diagnosis and therapy Lena Maier-Hein
• Active Data Canvas Samuel Payne

• 3D transcriptomics in mouse embryos. Visualisation of vertebrates embryos
• Fuse (different) data into (same) visualisation, biochemical image fusion, augmented image
• Computer assisted interventions, augmented reality. Photoacoustics. Machine learning, neural networks
• visualise and explore biological dataset, using GitHub. Set of widgets, data on GitHub

• Atlas of living Australia. Visualisations on maps
• Networks. Microbial and bacterial networks
• Visualisations on maps. (useful for metagenomic portal)

Posters