Crowdsourcing Genome Annotation

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Crowdsourcing Genome Annotation

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ccs14

Lightning talk (5 min) given at the Citizen Cyberscience Summit 2014

On Github bmpvieira / ccs14

Crowdsourcing Genome Annotation

bmpvieira.com/ccs14

Bruno Vieira | @bmpvieira

Queen Mary, University of London

What is genome annotation?

Demo

afra.sbcs.qmul.ac.uk

Afra

Web App to Crowdsource/Gamify Genome Annotation

Open Source

github.com/yeban/afra

Anurag Priyam

@yeban

WebApollo

github.com/gmod/apollo

apollo.berkeleybop.org

Software Stack

Bionode

github.com/bionode/bionode

Gamify

  • Scores
  • Open Badges
  • Certificates of Expertise

Machine Learning

Use data generated by users to improve gene prediction models

Thanks! Questions?

Bruno Vieira @bmpvieira

Anurag Priyam @yeban

Yannick Wurm @yannick__

bmpvieira.com/ccs14

© 2014 Bruno Vieira CC-BY 4.0